DatasetSet_04_transDMpreB_versus_WTpreB.phenotype_transDMpreB_versus_WTpreB.cls
#transDMpreB_versus_WTpreB
Phenotypephenotype_transDMpreB_versus_WTpreB.cls#transDMpreB_versus_WTpreB
Upregulated in classWTpreB
GeneSetNCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY
Enrichment Score (ES)-0.6716831
Normalized Enrichment Score (NES)-1.6839583
Nominal p-value0.0
FDR q-value0.032019023
FWER p-Value0.132
Table: GSEA Results Summary



Fig 1: Enrichment plot: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CYCS88217083.673-0.0141No
2BAX178328983.158-0.0035No
3CTSD2214262.192-0.0175No
4GRB72067315811.934-0.0131No
5VEGFA2296917611.685-0.0116No
6MAPK8645920141.381-0.0162No
7PRKCZ526020531.330-0.0094No
8BID17017 43523371.007-0.0181No
9ASAH13835 3853 863023461.004-0.0119No
10MAP2K11908225470.862-0.0170No
11GNA151967126720.770-0.0187No
12ITGB32063128590.619-0.0246No
13EGF1516930710.478-0.0329No
14SNX1523993 376131040.460-0.0316No
15MAP2K21993332940.375-0.0393No
16BCL28651 3928 13864 4435 981 4062 13863 402733170.365-0.0381No
17SLC9A3R223089 1544 151434010.330-0.0404No
18BAG4743134850.304-0.0429No
19GNAQ4786 23909 368537630.235-0.0563No
20AKT1856841840.164-0.0780No
21FOS2120242190.162-0.0787No
22BCAR11874142510.158-0.0794No
23PLCB2526242880.153-0.0803No
24ABL12693 4301 279443140.151-0.0807No
25PAK1952743330.148-0.0807No
26SHC19813 9812 543044210.139-0.0844No
27STAT5A2066445100.131-0.0883No
28PDGFRB2353945790.125-0.0912No
29SHB1049346640.118-0.0949No
30HRAS486847070.115-0.0965No
31PTPN1532550290.095-0.1132No
32FADD17536 8950 471156140.068-0.1443No
33PTPN22341457640.062-0.1520No
34NCK19447 515259960.056-0.1641No
35ACP1431760390.055-0.1660No
36SRC550762710.049-0.1782No
37CRADD1964063310.047-0.1810No
38RHOA8624 4409 441064940.044-0.1895No
39GRB10479969770.035-0.2153No
40HIF1A485070220.034-0.2175No
41CDC424503 8722 4504 246573630.028-0.2357No
42PDGFB22199 231182870.016-0.2855No
43GNA142390785610.012-0.3001No
44SMPD31875788870.008-0.3177No
45IGF13352 9156 340989000.008-0.3183No
46GNAO14785 382993600.002-0.3431No
47GNAI190249570-0.001-0.3543No
48PAWR19885 6589735-0.003-0.3632No
49LYN162819750-0.003-0.3639No
50PLCG1147539775-0.004-0.3652No
51STAT5B2022210037-0.007-0.3793No
52KDR1650910530-0.013-0.4058No
53DOK117104 1018 117710626-0.015-0.4108No
54SOS1547610751-0.016-0.4174No
55PTGS25317 965510832-0.017-0.4216No
56SPHK21217 1806 1215511209-0.023-0.4418No
57IRS1492511570-0.028-0.4611No
58PIK3R1317011694-0.031-0.4675No
59GNAI31519811722-0.031-0.4688No
60TRAF21465711751-0.032-0.4701No
61CBL1915411843-0.033-0.4748No
62PTPN115326 16391 966012087-0.038-0.4877No
63YES1593012441-0.046-0.5064No
64GNA12902312591-0.050-0.5142No
65TNF2300412665-0.052-0.5178No
66FLT13483 1628713007-0.061-0.5358No
67PDGFA523713612-0.087-0.5679No
68PIK3CA956213936-0.107-0.5846No
69VAV25848 267014239-0.130-0.6001No
70SPHK15484 1266 140214328-0.138-0.6040No
71JAK223893 9197 370614343-0.140-0.6038No
72GNAZ7114892-0.214-0.6320No
73MYC22465 943514983-0.233-0.6353No
74FYN3375 3395 2005215076-0.254-0.6386No
75AIFM12558 2416115127-0.263-0.6396No
76TNFRSF1A1181 1020615257-0.296-0.6446No
77LRP1928415456-0.363-0.6529No
78FGR472315626-0.432-0.6592No
79MAP4K41124115629-0.433-0.6565No
80CDH51851215869-0.553-0.6658No
81RIPK1538115903-0.580-0.6637No
82HCK1478715955-0.616-0.6624No
83ITGAV493115957-0.618-0.6584No
84PTPRJ966416204-0.867-0.6660Yes
85RASA11017416303-0.967-0.6649Yes
86MAPK142331316395-1.021-0.6631Yes
87BIRC31924716436-1.055-0.6583Yes
88PRKCD2189716559-1.188-0.6570Yes
89RAF11703516625-1.259-0.6523Yes
90MAPK36458 1117016645-1.295-0.6447Yes
91CASP8869416729-1.404-0.6400Yes
92GNA113300 3345 1967016744-1.435-0.6313Yes
93NCK2944816752-1.454-0.6221Yes
94RAC11630216919-1.693-0.6199Yes
95SMPD118145 265817033-1.831-0.6139Yes
96GRB22014917099-1.953-0.6046Yes
97SGPL11975717188-2.123-0.5953Yes
98SGPP12103917309-2.313-0.5866Yes
99SLC9A3R11125017339-2.365-0.5725Yes
100AKT313739 98217441-2.539-0.5613Yes
101MAP2K42040517452-2.546-0.5450Yes
102GNA132061717564-2.763-0.5328Yes
103BAD2400017607-2.854-0.5163Yes
104NFKBIA2106517794-3.356-0.5042Yes
105RELA2378317808-3.389-0.4826Yes
106DNM24635 310317822-3.423-0.4607Yes
107PRKRA35717904-3.689-0.4407Yes
108NFKB11516017907-3.696-0.4165Yes
109JUN1583217929-3.751-0.3929Yes
110MAP3K12134818225-4.997-0.3759Yes
111PTEN530518232-5.045-0.3430Yes
112CSK880518265-5.201-0.3104Yes
113GAB11882818330-5.503-0.2776Yes
114STAT13936 552418359-5.675-0.2417Yes
115STAT35525 990618377-5.818-0.2043Yes
116LCK1574618405-6.029-0.1660Yes
117CXCR41384418566-8.219-0.1204Yes
118MAPK11642 1116718603-9.259-0.0613Yes
119BLK3205 2179118607-9.4020.0005Yes
Table: GSEA details [plain text format]



Fig 2: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY: Random ES distribution   
Gene set null distribution of ES for NCI_SPHINGOSINE 1-PHOSPHATE (S1P) PATHWAY